Resolution

On the Remote Desktop Services server:

• Publish explorer as a RemoteApp on the application server: C:\Windows\explorer.exe
• Open properties (right-click on app) of published app and navigate to the "Parameters" tab.
• Select the option "Always use the following command-line parameters".
• For the parameters, fill in the location of the ClickOnce app file (probably with file extension .application), example (screenshot): C:\tmp\test.application
  • Note: If the ClickOnce app file is published as a URL, it's required to download the ClinckOnce app file to the RDS host first.
• Save the changes for the application.
  

On the Awingu appliance:

• Publish the above application as a Remote Application, use the alias that was created for the RemoteApp  above (in the example above: "explorer").